E-Commerce Software Comparison 2025: The Best Platforms for Filipino MSMEs

Choosing the right e-commerce software can define your business’s success in the digital age. With so many tools available, making an e-commerce software comparison helps Filipino MSMEs find the perfect match — one that balances cost, features, and ease of use. In 2025, local entrepreneurs have more options than ever before, including international players like Shopify and WooCommerce, as well as homegrown innovations such as Bentamo Hub (BNTM HUB) by BNTM Technologies Inc., a Filipino-built all-in-one business suite designed for MSMEs.


Why E-Commerce Software Matters for MSMEs

E-commerce software powers every online store you visit — from the shopping cart to payment checkout and inventory updates. For small and medium enterprises (SMEs) in the Philippines, the right software can:

  • Simplify store management without technical know-how.
  • Integrate sales, finance, and inventory into one view.
  • Handle local payments and logistics, including GCash, Maya, and COD.
  • Support business scalability without massive IT investment.

That’s why understanding the strengths and limitations of each platform is key before you commit.


E-Commerce Software Comparison: Popular Platforms in 2025

Below is a side-by-side look at the most commonly used e-commerce software solutions for Filipino MSMEs today.

PlatformKey FeaturesIdeal ForLimitations
ShopifyCloud-based; built-in hosting; supports multiple payment options.Businesses wanting a simple, hosted setup.Monthly fees and transaction costs can add up. Limited local integrations.
WooCommerceOpen-source plugin for WordPress; customizable with themes and plugins.Entrepreneurs who already have a WordPress site.Requires maintenance, hosting, and tech know-how.
Magento (Adobe Commerce)Enterprise-grade, powerful for large-scale operations.Medium to large businesses with tech teams.High cost and complexity for MSMEs.
Wix eCommerceDrag-and-drop builder; simple templates; integrated SEO tools.Freelancers or micro businesses starting small.Limited backend control and advanced features.
Bentamo Hub (BNTM HUB)All-in-one Filipino-built system integrating e-commerce, inventory, finance, HR, CRM, and payments.MSMEs wanting local support and full operational sync.Designed primarily for small to mid-size enterprises (not enterprise-only).

This e-commerce software comparison shows that while global platforms focus on online store functionality, Bentamo Hub takes it further — connecting your online sales with all your business operations in real time.


Why Integration Beats Fragmentation

Most MSMEs in the Philippines use different tools for different tasks: a separate system for online sales, another for accounting, and another for payroll. This leads to inefficiency, manual errors, and missed growth opportunities.

Bentamo Hub solves this by uniting all key operations — from your E-Commerce Module to Finance, Inventory, HR, and CRM — into one platform. When a customer makes an online purchase:

  • The Inventory Module updates stock automatically.
  • The Finance Module logs revenue and updates reports.
  • The CRM Module tracks the new customer and their purchase history.

Everything works together, seamlessly. No manual syncing, no data silos.


How Bentamo Hub Stands Out in 2025

🛒 E-Commerce Made Simple

Bentamo Hub’s E-Commerce Module lets MSMEs create an online store with a drag-and-drop interface — no coding needed. Businesses can upload product images, manage categories, and process payments from one dashboard.

💳 Integrated Online Payments

Supports GCash, Maya, debit/credit cards, and bank transfers. All transactions automatically link to your Finance Module for effortless accounting.

📦 Inventory & POS Integration

Every sale online or in-store syncs instantly. The POS and Inventory Modules prevent overstocking or missed items, making it ideal for retailers and small distributors.

📈 Finance & Reports

Track income, expenses, and cash flow in real time. Auto-generated reports help MSMEs make better financial decisions.

👥 Customer Relationship Management (CRM)

Manage leads, customer histories, and loyalty programs. Combine this with your e-commerce data for more personalized promotions.

📅 Project & HR Modules

For service-based businesses, Bentamo Hub includes HR, payroll, and project management — features that global e-commerce platforms rarely offer in one suite.

Learn more about the platform here.


Local Case Example: From Storefront to Online Success

Let’s say you own a handmade soap business in Davao City. You start by listing your products online using Bentamo Hub’s E-Commerce Module. Customers order through your website and pay via GCash.

Here’s what happens automatically:

  • The Inventory Module deducts the stock.
  • The Finance Module records the income and updates your sales summary.
  • The CRM Module logs the buyer’s details for remarketing.
  • You can view all of it in real time on your mobile dashboard.

This integrated approach lets small businesses scale without hiring extra staff or juggling multiple apps.


Bentamo Hub vs. Other E-Commerce Platforms

FeatureShopifyWooCommerceWixBentamo Hub
Hosted Solution
Local PH Payments⚠️ Limited⚠️ Plugin-based⚠️ Limited✅ Built-in
Inventory + Finance Sync⚠️ Manual plugins✅ Real-time
POS Integration⚠️ Add-on⚠️ Add-on✅ Native
CRM Module⚠️ Plugin✅ Built-in
HR & Project Tools✅ Included
Modular Pricing⚠️ Plugin-dependent
Local Support✅ Filipino Team

✅ = Built-in ⚠️ = Add-on ❌ = Not Available

This comparison shows how Bentamo Hub delivers a full ecosystem that global systems often lack — a powerful advantage for Philippine MSMEs seeking cost efficiency and local reliability.


What to Consider When Comparing E-Commerce Software

  1. Ease of Use: Can non-technical users manage the system?
  2. Local Payment Support: Does it include GCash, Maya, or bank integrations?
  3. Cost Efficiency: Are there hidden transaction fees or expensive plugins?
  4. Scalability: Can it grow with your business without requiring migration?
  5. Integration: Does it connect e-commerce with finance, inventory, and CRM?

Bentamo Hub checks all these boxes for MSMEs in the Philippines.


FAQs About E-Commerce Software Comparison

1. Which is the best e-commerce software for small businesses in the Philippines?
Bentamo Hub offers the most localized and integrated option for MSMEs, combining e-commerce, finance, inventory, and payments in one. Shopify and WooCommerce are also popular but may need plugins for local adaptation.

2. Is Bentamo Hub better than Shopify or WooCommerce?
For Filipino MSMEs, yes — because Bentamo Hub was built specifically for local needs, supports PH payment gateways, and includes modules for accounting and HR.

3. Can I migrate my current online store to Bentamo Hub?
Yes. Bentamo Hub’s onboarding team can help MSMEs import product data and transition smoothly.

4. How much does e-commerce software cost?
Plans range from ₱1,000 to ₱5,000 per month, depending on features. Bentamo Hub’s modular system lets you pay only for the modules you use.

5. Does Bentamo Hub support physical stores too?
Absolutely. The POS and Inventory Modules link directly to your e-commerce platform, allowing full omnichannel visibility.


The Smart Choice for Filipino MSMEs

The right e-commerce software isn’t just a sales tool — it’s a growth engine. While global platforms focus on online transactions, Bentamo Hub empowers Filipino MSMEs to manage every aspect of their operations in one place.

From Cagayan de Oro to Manila, small business owners now have access to a truly local solution that simplifies digital transformation — without the high cost of enterprise systems.

👉 Ready to compare your options in real time? Visit Bentamo Hub’s contact page and discover how their all-in-one system can power your MSME’s digital future.

Featured Business Directory

Scroll to Top